[RASMB] density matching ASB -14
Ariel Lustig
ariel.lustig at bluewin.ch
Sun Jan 10 00:42:03 PST 2010
Dear Colleauges ,Tina, Tom (Laue),
I agree absolutly to the here copied part of the mail of Tom( 9 Jan 2010 17:12)
>>Be aware, too, that solvent density matching using
other solvent components (e.g. salts, sugars) may result in a
significant shift in the protein's vbar if there is preferential
solvation, leading to inaccuracies in interpretation. Depending on what
you use to match density, preferential solvation may result in
substantial (5 - 10% error) in vbar. Since there is a 3-fold lever arm
that results in a 3% error in M for every 1% error in vbar, there may be
a 15-30% error in M if the preferential solvation is not accounted for.<<
At the BBA 1464 (2000) 199 -206 Ariel Lustig, paper, we calculated (better to say Prof. Andreas Engel
of the Basel Biozentrum calculated it) that The error with our methode is + / - 15% for the Mw, (just
mentioned on the first page, the Abstract)
Our opinion is, that the pourpose to determine how nany monomers contains such a micelle , even 15%
is a big help for biological systemes....yours...ariel
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